The detailed information of tRNA gene sequence


Sequence ID>W1610614167
Genome IDLGGV01000060
Search identical group
Phylum/ClassSynergistota
SpeciesSynergistales bacterium 58_81 [LGGV]
Start position on genome 7727
End posion on genome 7631
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tatggctgtc
tRNA gene sequence 
GGAGGCGAGTGTGCTCTGGTGAGTGCCCCGGGCTTCAAACCCGGTGGGGGTCGGTACGGC
CGGCTCCGGTGGGTTCGATTCCCACACGTCTCCGCCA
Downstream region at tRNA end position 
tttttttgcc
Secondary structure (Cloverleaf model)
>W1610614167	SeC	TCA
                   c      GCCA tttttttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     A   A          T T
                    G     C A C C C     A
      T C T        T      | | | | |     G
    G       C G T G       G T G G G     C
    G       | + + |                 T T
    T       G T G C
      G A          C     TGGGGGTCGGTACGGCCGGCTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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