The detailed information of tRNA gene sequence


Sequence ID>W1610615331
Genome IDLGKO01000005
Search identical group
Phylum/ClassChloroflexota
SpeciesThermanaerothrix daxensis [LGKO]
Start position on genome 488153
End posion on genome 488058
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttagaggt
tRNA gene sequence 
GGGGATGGGAGGGCTCCGGTGAGCCCCCCGGTCTTCAAAACCGGTGACGGGTCGCGTGGC
GAGCCGTGGTGGGTTCGACTCCCATTCATCCCCGCCt
Downstream region at tRNA end position 
caagcagagg
Secondary structure (Cloverleaf model)
>W1610615331	SeC(p)	TCA
                   t      GCCt caagcagagg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G + T          T C
                    G     T A C C C     A
      C C T        A      + | | | |     G
    G       C G G G       G T G G G     C
    G       | | | |                 T T
    T       G C C C
      G A          C     TGACGGGTCGCGTGGCGAGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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