The detailed information of tRNA gene sequence


Sequence ID>W1610615339
Genome IDLGKO01000006
Search identical group
Phylum/ClassChloroflexota
SpeciesThermanaerothrix daxensis [LGKO]
Start position on genome 55111
End posion on genome 55018
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccctgaaccc
tRNA gene sequence 
GGGGAGGTGCCAGAGAGGTCGAATGGGGCCGCCTGCTAAGTGGTTGTCGGGGTTAAAACC
TCGACCGCGGGTTCGAATCCCGCCCTCCCCGCCT
Downstream region at tRNA end position 
cgcgcacgcc
Secondary structure (Cloverleaf model)
>W1610615339	Ser	GCT
                   c      GCCT cgcgcacgcc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCGGGGTTAAAACCTCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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