The detailed information of tRNA gene sequence


Sequence ID>W1610615351
Genome IDLGKP01000015
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon geysericola [LGKP]
Start position on genome 284373
End posion on genome 284297
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaaaacgc
tRNA gene sequence 
GGGCTCGTGGTGTAGCGGCCTAACATGCCACTCTGTCACAGTGGAGATCGGGGGTTCGAA
TCCCCTCGGGCCCGCCA
Downstream region at tRNA end position 
atttttatct
Secondary structure (Cloverleaf model)
>W1610615351	Asp	GTC
                   c      GCCA atttttatct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G G G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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