The detailed information of tRNA gene sequence


Sequence ID>W1610617242
Genome IDLGTD01000105
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 152
End posion on genome 249
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaatcgtt
tRNA gene sequence 
GGACCGGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAAGGGAATAATTCCC
CGCAAGGGTCGTGGGTTCAAATCCCATCCGGTCCACTA
Downstream region at tRNA end position 
catcactcta
Secondary structure (Cloverleaf model)
>W1610617242	Val	CAC
                   t      ACTA catcactcta
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A C C C     A
    T T G A        C      + | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AAGGGAATAATTCCCCGCAAGGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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