The detailed information of tRNA gene sequence


Sequence ID>W1610617248
Genome IDLGTD01000371
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 2542
End posion on genome 2467
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtaggtttct
tRNA gene sequence 
GGGCTCATAGTCCAGGTCGGTTATGACGTCGCCCTTACACGGCGAAGATCCGGGGTTCAA
ATCCCCGTGGGCCCACtt
Downstream region at tRNA end position 
attctaaata
Secondary structure (Cloverleaf model)
>W1610617248	Val	TAC
                   t      ACtt attctaaata
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     G C C C C     A
    T G G A        A      | | | | |     A
  C         C C T G       C G G G G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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