The detailed information of tRNA gene sequence


Sequence ID>W1610617249
Genome IDLGTD01000387
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 1518
End posion on genome 1444
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
atagttcatt
tRNA gene sequence 
GGGCCGGTGATTTAGGGGTATAATGCCTCGTTCGCAACGAGGATGTCGAGGGTTCGATTC
TCTCCCGGTCCACCA
Downstream region at tRNA end position 
ttacttttgt
Secondary structure (Cloverleaf model)
>W1610617249	Ala	CGC
                   t      ACCA ttacttttgt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C T C T C     A
        G A        G      | | | + |     G
      G     T T T A       G A G G G     C
      G       | | |                 T T
      G     T A A T
        T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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