The detailed information of tRNA gene sequence


Sequence ID>W1610617251
Genome IDLGTD01000413
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 5088
End posion on genome 5173
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagagttttC
tRNA gene sequence 
GCAGAGGTCGCCTAGCTCGGTAGGGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCATACG
GGGGTTCAAATCCCTCTCTCTGCGTtt
Downstream region at tRNA end position 
taattttcta
Secondary structure (Cloverleaf model)
>W1610617251	Ser	TGA
                   C      GTtt taattttcta
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    T       T C C G       G G G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGTGCGCAAGCATAC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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