The detailed information of tRNA gene sequence


Sequence ID>W1610617263
Genome IDLGTD01001019
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 1180
End posion on genome 1107
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gaattttcgt
tRNA gene sequence 
GCTTCGATAGCTCAGCCTGGTAGAGCGTTACATTGGTAATGTAAAGGTCGCGGGTTCAGA
TCCCGTTCGAAGCTttt
Downstream region at tRNA end position 
tctgttttac
Secondary structure (Cloverleaf model)
>W1610617263	Thr	GGT
                   t      Tttt tctgttttac
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     T G C C C     G
      C G A        A      + | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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