The detailed information of tRNA gene sequence


Sequence ID>W1610617265
Genome IDLGTD01001038
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 2105
End posion on genome 2031
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgattcttgt
tRNA gene sequence 
GGGTTCGTAGTCTAGCCAGGTAGGACGATGGTCTCCAAAACCATCGGTCGTCGGTTCAAA
TCCGTCCGAGCCCACtt
Downstream region at tRNA end position 
actaatcata
Secondary structure (Cloverleaf model)
>W1610617265	Trp	CCA
                   t      ACtt actaatcata
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     C - G
                     G - C          T A
                    T     C T G C C     A
      C G A        A      |   | | |     A
    C       T C T G       G T C G G     C
    A       + | | |                 T T
    G       G G A C
      G T A        G     CGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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