The detailed information of tRNA gene sequence


Sequence ID>W1610617266
Genome IDLGTD01001056
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 2175
End posion on genome 2248
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atccaaaagt
tRNA gene sequence 
GCCTTGGTAGCTCAGCCTGGTAGAGCGAACGCCTCGTAAGCGTTAGGTCGTGGGTTCGTA
CCCCATCCAGGGCTttg
Downstream region at tRNA end position 
atttgtaaaa
Secondary structure (Cloverleaf model)
>W1610617266	Thr	CGT
                   t      Tttg atttgtaaaa
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     G - C
                     G - C          C A
                    T     T A C C C     T
      C G A        A      + | | | |     G
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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