The detailed information of tRNA gene sequence


Sequence ID>W1610617267
Genome IDLGTD01001058
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sp. DDS1 [LGTD]
Start position on genome 3036
End posion on genome 2965
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
tttttaaaac
tRNA gene sequence 
GGTACTCTGGCAGAACGGTTATGCGTGAGCCTGCAAAGCTTATACAAGGGGGTTCGACTC
CCTCGGGTACCTtat
Downstream region at tRNA end position 
tttacaatca
Secondary structure (Cloverleaf model)
>W1610617267	Pseudo	GCA
                   c      Ttat tttacaatca
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     T + G
                     C - G          T C
                    T     C T C C C     A
        A A        G      | + | | |     G
      C     G A C G       G G G G G     C
      G       | | |                 T T
      G     A T G C
        T T        G     TACAA
                    T - A
                    G + T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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