The detailed information of tRNA gene sequence


Sequence ID>W1610623732
Genome IDLHXJ01000077
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259A05 MSBL1 archaeon SCGC-AAA259A05 [LHXJ]
Start position on genome 3557
End posion on genome 3630
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttctaatgtg
tRNA gene sequence 
GCCGGGGTAGGGTAGTGGCTTAACCTTCGGGACTGTGGCTCCCGCGCCCCGGGTTCGAAT
CCCGGCCTCGGCCCtt
Downstream region at tRNA end position 
ccatatccat
Secondary structure (Cloverleaf model)
>W1610623732	His	GTG
                   g      CCtt ccatatccat
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T G G G       C C G G G     C
    G       | | | +                 T T
    C       A C C T
      T T A        T     CGCC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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