The detailed information of tRNA gene sequence


Sequence ID>W1610623741
Genome IDLHXL01000004
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259D14 MSBL1 archaeon SCGC-AAA259D14 [LHXL]
Start position on genome 17554
End posion on genome 17627
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggctctcata
tRNA gene sequence 
GGGCCCGTAGCTCAGCTGGGAGAGCGTCGCCTTTGCAAGGCGAAGGTCCCGGGTTCGAGT
CCCGGTGGGTCCACtg
Downstream region at tRNA end position 
cactattgca
Secondary structure (Cloverleaf model)
>W1610623741	Ala	TGC
                   a      ACtg cactattgca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T          T G
                    T     G G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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