The detailed information of tRNA gene sequence


Sequence ID>W1610623744
Genome IDLHXL01000022
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259D14 MSBL1 archaeon SCGC-AAA259D14 [LHXL]
Start position on genome 2293
End posion on genome 2204
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacggttgt
tRNA gene sequence 
GCCGGGGTGGCCCAGTCTGGTAACGGCGCTAGCTTGCTAAGCTAGTTGCGCGCGAGCGCT
TCCCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
ttccattatc
Secondary structure (Cloverleaf model)
>W1610623744	Ser	GCT
                   t      GCCA ttccattatc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  T         C C C G       C C G G G     C
  G           | | |                 T T
  G         C G G C
    T A A          G     TTGCGCGCGAGCGCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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