The detailed information of tRNA gene sequence


Sequence ID>W1610623759
Genome IDLHXN01000025
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259E17 MSBL1 archaeon SCGC-AAA259E17 [LHXN]
Start position on genome 241
End posion on genome 166
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
attgattgga
tRNA gene sequence 
GGGCCCGTAGCTCAGTCGGCAGAGCGCCACCTTCGCAAGGTGGAAGTCCCGGGTTCGAGT
CCCGGCGGGTCCACCA
Downstream region at tRNA end position 
tcccctctca
Secondary structure (Cloverleaf model)
>W1610623759	Ala	CGC
                   a      ACCA tcccctctca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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