The detailed information of tRNA gene sequence


Sequence ID>W1610623769
Genome IDLHXO01000018
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259E19 MSBL1 archaeon SCGC-AAA259E19 [LHXO]
Start position on genome 12318
End posion on genome 12241
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gataatccgc
tRNA gene sequence 
GGGGCTGTGGGGTAGTCAGGTCTAGCCTTCTGGCTTTGGGTGCCAGTGACCCCGGTTCAA
ATCCGGGCAGCCCCACCT
Downstream region at tRNA end position 
tcagccttcc
Secondary structure (Cloverleaf model)
>W1610623769	Pro	TGG
                   c      ACCT tcagccttcc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
    C T G A        G      | | | | |     A
  A         T G G G       C C C G G     C
  G         + | | +                 T T
  G         G C C T
    T C T A        T     TGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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