The detailed information of tRNA gene sequence


Sequence ID>W1610623793
Genome IDLHXR01000023
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259I09 MSBL1 archaeon SCGC-AAA259I09 [LHXR]
Start position on genome 11140
End posion on genome 11215
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ttctttaaga
tRNA gene sequence 
AGCCCCGTGGTGTAGTGGTCAAGCATGCGAGGTTCTGGTCCTCGTGACGGTGGTTCGAAT
CCGCCCGGGGCTACCA
Downstream region at tRNA end position 
atctataatt
Secondary structure (Cloverleaf model)
>W1610623793	Gln	CTG
                   a      ACCA atctataatt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | + | |     G
    G       T G T G       G G T G G     C
    G       + | | +                 T T
    T       G C A T
      C A A        G     TGAC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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