The detailed information of tRNA gene sequence


Sequence ID>W1610623821
Genome IDLHXU01000028
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA259M10 MSBL1 archaeon SCGC-AAA259M10 [LHXU]
Start position on genome 4575
End posion on genome 4652
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taaaaaaatc
tRNA gene sequence 
GCCCCGGTGGTGTAGTCCGGCCAAGCATTCCGGCCTTTCGAGCCGGTGACCCGGGTTCAA
ATCCCGGCCGGGGCACCT
Downstream region at tRNA end position 
cggtctttta
Secondary structure (Cloverleaf model)
>W1610623821	Glu	TTC
                   c      ACCT cggtctttta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        T     TGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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