The detailed information of tRNA gene sequence


Sequence ID>W1610623868
Genome IDLHXZ01000012
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA261F19 MSBL1 archaeon SCGC-AAA261F19 [LHXZ]
Start position on genome 5667
End posion on genome 5743
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ataccagtaa
tRNA gene sequence 
GGGCCCGTGGCGTAGTCTGGGAGCGCACCGGCCTTTTAAGCCGGCAGTCGTGGGTTCAAA
TCCCGCCGGGCCCGCTA
Downstream region at tRNA end position 
aagtagttat
Secondary structure (Cloverleaf model)
>W1610623868	Lys	TTT
                   a      GCTA aagtagttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | + | | |     A
    C       T G C G       G T G G G     C
    T       + | | |                 T T
    G       G C G C
      G G A        A     CAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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