The detailed information of tRNA gene sequence


Sequence ID>W1610623872
Genome IDLHXZ01000053
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA261F19 MSBL1 archaeon SCGC-AAA261F19 [LHXZ]
Start position on genome 4354
End posion on genome 4442
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtaattgaa
tRNA gene sequence 
GCCGGGGTGGCAGAATCAGGAAATGCGCTGGCCTTGAGAGCCAGTGGCCCTCTAGGGCCT
TCTGGGTTCAAATCCCAGCCCCGGCGCCA
Downstream region at tRNA end position 
aactcaattt
Secondary structure (Cloverleaf model)
>W1610623872	Ser	TGA
                   a      GCCA aactcaattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T A A        G      | | | | |     A
    C       G A C G       C T G G G     C
    A         | | |                 T T
    G       A T G C
      G A A        G     TGGCCCTCTAGGGCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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