The detailed information of tRNA gene sequence


Sequence ID>W1610623878
Genome IDLHYA01000002
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA261G05 MSBL1 archaeon SCGC-AAA261G05 [LHYA]
Start position on genome 11604
End posion on genome 11692
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataatttatt
tRNA gene sequence 
GCCGGGGTGGCAGAACCAGGTTAATGCGCCGGCTTTGAGAGCCGGTGGCCCAGTGGGCCA
TCTGGGTTCAAATCCCAGCCCCGGCGCCA
Downstream region at tRNA end position 
tggtgattca
Secondary structure (Cloverleaf model)
>W1610623878	Ser	TGA
                   t      GCCA tggtgattca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C C A A        G      | | | | |     A
  A         G A C G       C T G G G     C
  G           | | |                 T T
  G         A T G C
    T T A          G     TGGCCCAGTGGGCCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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