The detailed information of tRNA gene sequence


Sequence ID>W1610623881
Genome IDLHYA01000006
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA261G05 MSBL1 archaeon SCGC-AAA261G05 [LHYA]
Start position on genome 17469
End posion on genome 17556
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gaccttgaga
tRNA gene sequence 
GCGGGGGTAGCCAAGTCTGGTCAAAGGCGCAGCGTTCAGGGCGCTGTCCCATAGGGGTTC
GAGGGTTCAAATCCCTTCCCCCGCACCT
Downstream region at tRNA end position 
taatcaacgt
Secondary structure (Cloverleaf model)
>W1610623881	Leu	CAG
                   a      ACCT taatcaacgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C T G A        A      + | | | |     A
  T         A C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCATAGGGGTTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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