The detailed information of tRNA gene sequence


Sequence ID>W1610623890
Genome IDLHYB01000042
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA261O19 MSBL1 archaeon SCGC-AAA261O19 [LHYB]
Start position on genome 3478
End posion on genome 3389
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attattattg
tRNA gene sequence 
GCCGGGGTGGCGGAACCTGGTTATCGCGCGGGCTTGGAGAGCCCGTGGTCCTTCGGGACC
TTCTGGGTTCAAATCCCAGCCCCGGCGCCA
Downstream region at tRNA end position 
tttgagtttc
Secondary structure (Cloverleaf model)
>W1610623890	Ser	GGA
                   g      GCCA tttgagtttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C C A A        G      | | | | |     A
  T         G G C G       C T G G G     C
  G         + | | |                 T T
  G         T C G C
    T T A          G     TGGTCCTTCGGGACCTT
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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