The detailed information of tRNA gene sequence


Sequence ID>W1610623897
Genome IDLHYC01000072
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA382A03 MSBL1 archaeon SCGC-AAA382A03 [LHYC]
Start position on genome 1897
End posion on genome 1809
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaacatccgt
tRNA gene sequence 
GCCGGGGTGGCAGAATCTGGCAATGCGCCAGCTTGGAGAGCTGGTGGCCGTTTATGGCCT
TCTGGGTTCGAATCCCAGCCCCGGCGCCA
Downstream region at tRNA end position 
tttttactca
Secondary structure (Cloverleaf model)
>W1610623897	Ser	GGA
                   t      GCCA tttttactca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T A A        G      | | | | |     G
    C       G A C G       C T G G G     C
    T         | | |                 T T
    G       A T G C
      G C A        G     TGGCCGTTTATGGCCTT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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