The detailed information of tRNA gene sequence


Sequence ID>W1610623924
Genome IDLHYI01000012
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA382M17 MSBL1 archaeon SCGC-AAA382M17 [LHYI]
Start position on genome 8933
End posion on genome 9018
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
atttctgtgt
tRNA gene sequence 
GCGGGGGTTGCCGAGTCAGGTCAAAGGCGCAGCGTTCAGGGCGCTGTCCCATAGGGGTTC
GAGGGTTCGAATCCCTCCCCCCGCACtc
Downstream region at tRNA end position 
cacttcactg
Secondary structure (Cloverleaf model)
>W1610623924	Leu	CAG
                   t      ACtc cacttcactg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        T      | | | | |     G
  A         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCATAGGGGTTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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