The detailed information of tRNA gene sequence


Sequence ID>W1610623931
Genome IDLHYJ01000027
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA382N08 MSBL1 archaeon SCGC-AAA382N08 [LHYJ]
Start position on genome 5394
End posion on genome 5467
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ataaaacata
tRNA gene sequence 
GGGTGCATAGCTCAGAGGTTAGAGCGCTATCTTCACATGATAGAGGTCTCTGGTTCAAAT
CCAGATGCACCCACtt
Downstream region at tRNA end position 
ttttattact
Secondary structure (Cloverleaf model)
>W1610623931	Val	CAC
                   a      ACtt ttttattact
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     A - T          T A
                    T     A G A C C     A
      A G A        A      | | | | |     A
    G       C T C G       T C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    T - A
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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