The detailed information of tRNA gene sequence


Sequence ID>W1610623934
Genome IDLHYK01000006
Search identical group
Phylum/ClassEuryarchaeota
Speciescandidate division MSBL1 archaeon SCGC-AAA385D11 MSBL1 archaeon SCGC-AAA385D11 [LHYK]
Start position on genome 11461
End posion on genome 11388
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggttctcgga
tRNA gene sequence 
GGGCCCGTAGCTCACTTGGTAGAGCGTCGCCTTTGCAAGGCGAAGGCTCCGGGTTCAAGT
CCCGGCGGGTCCACtt
Downstream region at tRNA end position 
taatcgatgc
Secondary structure (Cloverleaf model)
>W1610623934	Ala	TGC
                   a      ACtt taatcgatgc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      T C A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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