The detailed information of tRNA gene sequence


Sequence ID>W1610627179
Genome IDLIDI01000016
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMethylophilales bacterium BACL14 MAG-120920-bin58 [LIDI]
Start position on genome 14584
End posion on genome 14493
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgcgtcac
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAAAGCGTGTTTAGGGTGAACTCCC
TAACGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
ataaaaattt
Secondary structure (Cloverleaf model)
>W1610627179	Ser	GGA
                   c      GCCA ataaaaattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTAGGGTGAACTCCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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