The detailed information of tRNA gene sequence


Sequence ID>W1610627363
Genome IDLIDO01000308
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesOpitutaceae bacterium BACL24 MAG-120322-bin51 [LIDO]
Start position on genome 1864
End posion on genome 1953
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctccatttta
tRNA gene sequence 
GGAGAAGTGGCAGAGTGGCCGAATGTGACTGACTCGAAATCAGTTGTGCTAGAAATGGCA
CCGGGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tttnnnnnnn
Secondary structure (Cloverleaf model)
>W1610627363	Ser	CGA
                   a      GCCA tttnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | +                 T T
    C       A T G T
      C G A        G     TGTGCTAGAAATGGCACC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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