The detailed information of tRNA gene sequence


Sequence ID>W1610640546
Genome IDLIZR01000146
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium DG_23 [LIZR]
Start position on genome 5712
End posion on genome 5809
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaaaaaggt
tRNA gene sequence 
GGGAGTGTAAAGGTGCCTGGTGGACCTCCTGGACTTCAAATCCAGTGCGGGGCTACGAAC
AAGTCCCGGGTGGGTTCGATTCCCATACGCTCCCGCCA
Downstream region at tRNA end position 
atatagtttt
Secondary structure (Cloverleaf model)
>W1610640546	SeC(p)	TCA
                   t      GCCA atatagtttt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    A     T A C C C     A
      C C G        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       | | | |                 T T
    G       A C C T
      T G G        C     TGCGGGGCTACGAACAAGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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