The detailed information of tRNA gene sequence


Sequence ID>W1610651847
Genome IDLJKK01000027
Search identical group
Phylum/ClassUnclassified
SpeciesMethanomassiliicoccales archaeon RumEn M1 [LJKK]
Start position on genome 718
End posion on genome 643
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
gtgcttacat
tRNA gene sequence 
AGCGGGGTGGGGTAGCCAGGACATCCCGTCGGGCTCATAACCCGGAGACCGGTCGTTCAA
ATCGACCCCCCGCTACtc
Downstream region at tRNA end position 
ctttattctt
Secondary structure (Cloverleaf model)
>W1610651847	Pseudo	CAT
                   t      ACtc ctttattctt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A G C     A
    C C G A        G      | | | | |     A
  A         T G G G       G G T C G     C
  G           | | |                 T T
  G         T C C C
    A C A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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