The detailed information of tRNA gene sequence


Sequence ID>W1610651866
Genome IDLJKK01000135
Search identical group
Phylum/ClassUnclassified
SpeciesMethanomassiliicoccales archaeon RumEn M1 [LJKK]
Start position on genome 3106
End posion on genome 3183
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccagacccac
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGTCCATCCTTCGCGGTTCGGGACCTCGAGACGCCAGTTCAA
ATCTGGCCGGCCCCACCA
Downstream region at tRNA end position 
gccctcattt
Secondary structure (Cloverleaf model)
>W1610651866	Pro	CGG
                   c      ACCA gccctcattt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G G T C     A
    T C G A        G      | | | | |     A
  T         T G G G       G C C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        T     AGAC
                    C - G
                    G - C
                    C   T
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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