The detailed information of tRNA gene sequence


Sequence ID>W1610662417
Genome IDLJTM01000178
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira bacterium SG8_35_4 [LJTM]
Start position on genome 17
End posion on genome 107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcactaatct
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTAGACGTTCATAGCGT
CTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaaatgcagc
Secondary structure (Cloverleaf model)
>W1610662417	Ser	GGA
                   t      GCCA gaaatgcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAGACGTTCATAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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