The detailed information of tRNA gene sequence


Sequence ID>W1610663430
Genome IDLJUS01000097
Search identical group
Phylum/ClassChloroflexota
SpeciesAnaerolineae bacterium SM23_ 63 [LJUS]
Start position on genome 5933
End posion on genome 6028
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agttccgtga
tRNA gene sequence 
GGGAGTGGTTGGGTCCCGGTGGGCTCCCCGGTCTTCAAAACCGGTGGCGGGCTGCACAGC
GGGCCGCGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
tgttattcat
Secondary structure (Cloverleaf model)
>W1610663430	SeC(p)	TCA
                   a      GCCt tgttattcat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G G       G T G G G     C
    G       + | + |                 T T
    T       G C T C
      G G          C     TGGCGGGCTGCACAGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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