The detailed information of tRNA gene sequence


Sequence ID>W1610663705
Genome IDLJVB01000005
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillales bacterium SM1_46 [LJVB]
Start position on genome 28137
End posion on genome 28061
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcctttttc
tRNA gene sequence 
GGCTAGGTAGCTCAGCTGGTTAGAGCGCGGCACTCATAATGCTGAGGTCGGCGGTTCGAT
CCCGCCCCTAGCCACCA
Downstream region at tRNA end position 
acttcctttt
Secondary structure (Cloverleaf model)
>W1610663705	Met	CAT
                   c      ACCA acttcctttt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          C T
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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