The detailed information of tRNA gene sequence


Sequence ID>W1610663829
Genome IDLJVF01000116
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPhycisphaerae bacterium SM1_79 [LJVF]
Start position on genome 2443
End posion on genome 2531
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgcttttaT
tRNA gene sequence 
GGAGAGGTGTCGGAGTGGCTGATCGAGCCGGTTTCGAAAACCGGTGTGCCCGTAAGGGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGTtt
Downstream region at tRNA end position 
gttttctaca
Secondary structure (Cloverleaf model)
>W1610663829	Ser	CGA
                   T      GTtt gttttctaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C T       G C G G G     C
    G       + | | |                 T T
    C       T C G A
      T G A        G     TGTGCCCGTAAGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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