The detailed information of tRNA gene sequence


Sequence ID>W1610671074
Genome IDLKCM01000141
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanoperedens sp. BLZ1 [LKCM]
Start position on genome 1637
End posion on genome 1563
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
ccagtaagga
tRNA gene sequence 
GGGGTTGTAGGGTAGCCTGGTCCATCCTATAGCGTTCGGGACGCTGTGACCTGAGTTCAA
ATCTCAGCAACCCCAttt
Downstream region at tRNA end position 
ctcaggacac
Secondary structure (Cloverleaf model)
>W1610671074	Pseudo	CGG
                   a      Attt ctcaggacac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    T + G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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