The detailed information of tRNA gene sequence


Sequence ID>W1610679814
Genome IDLKKM01000028
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas sp. TTU2014-105ASC [LKKM]
Start position on genome 30210
End posion on genome 30299
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtcgatcc
tRNA gene sequence 
GGTGAGGTGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTA
TCAAGGGTTCGAATCCCTTCCTCACCGCCA
Downstream region at tRNA end position 
tatagcaaat
Secondary structure (Cloverleaf model)
>W1610679814	Ser	GGA
                   c      GCCA tatagcaaat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGAGAAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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