The detailed information of tRNA gene sequence


Sequence ID>W1610682179
Genome IDLKML01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferacaceae archaeon B1-Br10_E2g22 [LKML]
Start position on genome 10600
End posion on genome 10527
Amino Acid Pseudo
Anticodon GTG
Upstream region at tRNA start position 
tgattgcgtg
tRNA gene sequence 
TCCGGGTTGGGGTAGTGGACTATCCTTCAGCCTTGTGGAGGCTGAGACGCGGGTTCGATT
CTCGCACCTGGACCtt
Downstream region at tRNA end position 
tctgttcgga
Secondary structure (Cloverleaf model)
>W1610682179	Pseudo	GTG
                   g      CCtt tctgttcgga
                     T - A
                     C - G
                     C - G
                     G + T
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T C     A
      T G A        G      | | | + |     G
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      C T A        T     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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