The detailed information of tRNA gene sequence


Sequence ID>W1610682315
Genome IDLKMS01000029
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferacaceae archaeon PL-Br10_E2g29 [LKMS]
Start position on genome 6641
End posion on genome 6715
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcgacagcac
tRNA gene sequence 
GCTCTGATGGTGTAGTCCGGCCAATCATATTACCCTCTCACGGTAATGACCGGGGTTCAA
ATCCCCGTCGGAGCAttt
Downstream region at tRNA end position 
tctgaacgaa
Secondary structure (Cloverleaf model)
>W1610682315	Glu	CTC
                   c      Attt tctgaacgaa
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C
                     A - T          T A
                    T     G C C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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