The detailed information of tRNA gene sequence


Sequence ID>W1610682338
Genome IDLKMT01000119
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferacaceae archaeon PL-Br10_E2g46 [LKMT]
Start position on genome 4264
End posion on genome 4188
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttgcaggcgc
tRNA gene sequence 
GCTAGGAGAGCATAGGCGGTTTATGCACTCGACTTGTAATCGAGACTTCCGGGGTTCAAA
TCCCCGTCCTAGCTCTA
Downstream region at tRNA end position 
ttttgttccg
Secondary structure (Cloverleaf model)
>W1610682338	Thr	TGT
                   c      TCTA ttttgttccg
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    G     G C C C C     A
      G G A        A      | | | | |     A
    C       T A C G       C G G G G     C
    G       | | | |                 T T
    G       A T G C
      T T T        A     ACTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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