The detailed information of tRNA gene sequence


Sequence ID>W1610682343
Genome IDLKMT01000160
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferacaceae archaeon PL-Br10_E2g46 [LKMT]
Start position on genome 5007
End posion on genome 5079
Amino Acid Pseudo
Anticodon CTG
Upstream region at tRNA start position 
ctgaaaatga
tRNA gene sequence 
AGTCCCGTGGGGTAGAGGCCAATCCTGTTGCCTTCTGGGGGCAACGACCGCGGTTCGAAT
CCGTGTGGGACTAttc
Downstream region at tRNA end position 
gtttactctt
Secondary structure (Cloverleaf model)
>W1610682343	Pseudo	CTG
                   a      Attc gtttactctt
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     G T G C C     A
      A G A        G      | + | | |     G
    G       T G G G       C G C G G     C
    G         | | +                 T T
    C       T C C T
      C A A        G     CGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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