The detailed information of tRNA gene sequence


Sequence ID>W1610682360
Genome IDLKMU01000102
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum sp. PL-Br10_E2g5 [LKMU]
Start position on genome 5319
End posion on genome 5403
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccaaccctgc
tRNA gene sequence 
GCGGGGGTGGCTGAGCCTGGCCAAAAGCGGCGGACTTAAGATCCGCTCCTGTAGAGGTTC
GAGGGTTCGAATCCCTTCCCCCGCAttg
Downstream region at tRNA end position 
tgagacacga
Secondary structure (Cloverleaf model)
>W1610682360	Leu	TAA
                   c      Attg tgagacacga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + | | | |     G
  T         G T C G       G A G G G     C
  G           | | |                 T T
  G         A A G C
    C C A A        G     TCCTGTAGAGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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