The detailed information of tRNA gene sequence


Sequence ID>W1610682509
Genome IDLKNB01000034
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium Tc-Br11_B2g6_7 [LKNB]
Start position on genome 1250
End posion on genome 1340
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaatagcgct
tRNA gene sequence 
GGAGGGATGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGAGCCCTTCTGGGGC
TCCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tacaagcccc
Secondary structure (Cloverleaf model)
>W1610682509	Ser	CGA
                   t      GCCA tacaagcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCCCTTCTGGGGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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