The detailed information of tRNA gene sequence


Sequence ID>W1610682511
Genome IDLKNB01000037
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium Tc-Br11_B2g6_7 [LKNB]
Start position on genome 26301
End posion on genome 26390
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgttgtgtc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTCGAATGCACTGGTCTTGAAAACCAGCGTGCCCTTGCGGGTA
CCGGGGGTTCGAATCCCTCCCCCTCCGCCT
Downstream region at tRNA end position 
tttctttttt
Secondary structure (Cloverleaf model)
>W1610682511	Ser	TGA
                   c      GCCT tttctttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGTGCCCTTGCGGGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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