The detailed information of tRNA gene sequence


Sequence ID>W1610723766
Genome IDLMDP01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. Root123D2 [LMDP]
Start position on genome 1546744
End posion on genome 1546820
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgggccacaa
tRNA gene sequence 
CGGGGTATAGCGTAGCCTGGTAGCGCGGCAGTTTTGGGTACTGCAGGTCGGAGGTTCGAA
TCCTCCTGCCCCGACCA
Downstream region at tRNA end position 
gcccaagtca
Secondary structure (Cloverleaf model)
>W1610723766	Pro	TGG
                   a      ACCA gcccaagtca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    C       T G C G       G G A G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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