The detailed information of tRNA gene sequence


Sequence ID>W1610752468
Genome IDLNDN01000127
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium Ga0077522 [LNDN]
Start position on genome 15600
End posion on genome 15695
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccgttcattt
tRNA gene sequence 
GGAAGCCAATGGGGCCCGGTGGCCCTCCCGGTCTTCAAAACCGGTGGTGTCCCGTCATGC
GGGATGGCTGGGTTCGACTCCCAGGGGCTTCCGCCA
Downstream region at tRNA end position 
cgttcaggcg
Secondary structure (Cloverleaf model)
>W1610752468	SeC(p)	TCA
                   t      GCCA cgttcaggcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     C - G
                     A   G          T C
                    A     G A C C C     A
      C C C        T      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TGGTGTCCCGTCATGCGGGATGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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