The detailed information of tRNA gene sequence


Sequence ID>W1610753510
Genome IDLNEO01000094
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium Ga0077539 [LNEO]
Start position on genome 13580
End posion on genome 13484
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgtctgcgac
tRNA gene sequence 
GGAGTCACTTCCCGAGCTGGTGACGGGCCCGGTCTTCAAAACCGGTGGACACGCGGCTTT
CGTCGCGGTCGGCAGGTTCGATTCCTGTGTGGCTCCGtgg
Downstream region at tRNA end position 
ttttttcgtg
Secondary structure (Cloverleaf model)
>W1610753510	SeC(p)	TCA
                   c      Gtgg ttttttcgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     C - G
                     A - T
                     C - G          T T
                    T     T G T C C     A
      C G A        T      + | | | |     G
    T       G C C C       G C A G G     C
    G       | | | |                 T T
    G       C G G G
      T G A        C     TGGACACGCGGCTTTCGTCGCGGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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