The detailed information of tRNA gene sequence


Sequence ID>W1610754851
Genome IDLNGD01000137
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanofastidiosum methylthiophilus group archaeon U1lsi0528_Bin089 [LNGD]
Start position on genome 143
End posion on genome 56
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagtcagctg
tRNA gene sequence 
GGAGGTGTGCCAGAGTGGTCGAATGGGCCTGTCTTGAAAACAGGTATACCGCAAGGTATC
GAAGGTTCGAATCCTTCCGCCTCCGCAA
Downstream region at tRNA end position 
ttcagttgct
Secondary structure (Cloverleaf model)
>W1610754851	Ser	TGA
                   g      GCAA ttcagttgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A A G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TATACCGCAAGGTATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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